Uses of Package
pl.poznan.put.structure
Packages that use pl.poznan.put.structure
Package
Description
A set of enums describing different notations used in structural biology.
Contains classes which work on data from PDB or mmCIF files.
Package contains classes useful in describing secondary structure (base pairs, helices, etc.)
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Classes in pl.poznan.put.structure used by pl.poznan.put.notation
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Classes in pl.poznan.put.structure used by pl.poznan.put.pdb.analysisClassDescriptionA base pair which is classified and quantified with numerical parameters.
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Classes in pl.poznan.put.structure used by pl.poznan.put.rna
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Classes in pl.poznan.put.structure used by pl.poznan.put.structureClassDescriptionA pair of residues with metadata taken from analysis tool.A pairing between two nucleotides' bases.A pair of interacting nucleotides with classification info.A single symbol in a dot-bracket structure.An information whether a base pair originated from a helix.Immutable implementation of
AnalyzedBasePair.Builds instances of typeImmutableAnalyzedBasePair.Immutable implementation ofBasePair.Builds instances of typeImmutableBasePair.Immutable implementation ofDotBracketSymbol.Builds instances of typeImmutableDotBracketSymbol.Immutable implementation ofQuantifiedBasePair.Builds instances of typeImmutableQuantifiedBasePair.A base pair which is classified and quantified with numerical parameters. -
Classes in pl.poznan.put.structure used by pl.poznan.put.structure.formatsClassDescriptionA pair of interacting nucleotides with classification info.A single symbol in a dot-bracket structure.