Package pl.poznan.put.notation

package pl.poznan.put.notation

A set of enums describing different notations used in structural biology.

Enums

Class	Description
BPh	A base-phosphate notation described in: Classification and Energetics of the Base-Phosphate Interactions in RNA.
BR	A base-ribose notation described in: Classification and Energetics of the Base-Phosphate Interactions in RNA.
LeontisWesthof	A classification of RNA base pairs described in: Geometric Nomenclature and Classification of RNA Base Pairs.
NucleobaseEdge	An edge of the nucleobase.
Saenger	A classification of RNA base pairs described in Principles of Nucleic Acid Structure.
StackingTopology	Stacking topologies are described in: New Metrics for Comparing and Assessing Discrepancies between RNA 3D Structures and Models.
Stericity	A base pair stericity, either cis or trans.