Uses of Class
pl.poznan.put.structure.ImmutableQuantifiedBasePair
Packages that use ImmutableQuantifiedBasePair
Package
Description
Package contains classes useful in describing secondary structure (base pairs, helices, etc.)
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Uses of ImmutableQuantifiedBasePair in pl.poznan.put.structure
Methods in pl.poznan.put.structure that return ImmutableQuantifiedBasePairModifier and TypeMethodDescriptionImmutableQuantifiedBasePair.Builder.build()Builds a newImmutableQuantifiedBasePair.static ImmutableQuantifiedBasePairImmutableQuantifiedBasePair.copyOf(QuantifiedBasePair instance) Creates an immutable copy of aQuantifiedBasePairvalue.static ImmutableQuantifiedBasePairImmutableQuantifiedBasePair.of(BasePair basePair, double shear, double stretch, double stagger, double buckle, double propeller, double opening) Construct a new immutableQuantifiedBasePairinstance.ImmutableQuantifiedBasePair.withBasePair(BasePair value) Copy the current immutable object by setting a value for thebasePairattribute.Copy the current immutable object by setting a value for thebphattribute.Copy the current immutable object by setting a value for thebrattribute.ImmutableQuantifiedBasePair.withBuckle(double value) Copy the current immutable object by setting a value for thebuckleattribute.ImmutableQuantifiedBasePair.withInteractionType(InteractionType value) Copy the current immutable object by setting a value for theinteractionTypeattribute.ImmutableQuantifiedBasePair.withIsRepresented(boolean value) Copy the current immutable object by setting a value for theisRepresentedattribute.ImmutableQuantifiedBasePair.withLeontisWesthof(LeontisWesthof value) Copy the current immutable object by setting a value for theleontisWesthofattribute.ImmutableQuantifiedBasePair.withOpening(double value) Copy the current immutable object by setting a value for theopeningattribute.ImmutableQuantifiedBasePair.withPropeller(double value) Copy the current immutable object by setting a value for thepropellerattribute.ImmutableQuantifiedBasePair.withSaenger(Saenger value) Copy the current immutable object by setting a value for thesaengerattribute.ImmutableQuantifiedBasePair.withShear(double value) Copy the current immutable object by setting a value for theshearattribute.ImmutableQuantifiedBasePair.withStackingTopology(StackingTopology value) Copy the current immutable object by setting a value for thestackingTopologyattribute.ImmutableQuantifiedBasePair.withStagger(double value) Copy the current immutable object by setting a value for thestaggerattribute.ImmutableQuantifiedBasePair.withStretch(double value) Copy the current immutable object by setting a value for thestretchattribute.