Uses of Package
pl.poznan.put.pdb
Packages that use pl.poznan.put.pdb
Package
Description
Contains classes responsible for PDB/mmCIF data modelling and analysis.
Contains classes which work on data from PDB or mmCIF files.
Package contains classes useful in describing secondary structure (base pairs, helices, etc.)
Contains classes dealing with torsion angles handling.
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Classes in pl.poznan.put.pdb used by pl.poznan.put.external.dssrClassDescriptionClass that represents a residue identifier with a known name.
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Classes in pl.poznan.put.pdb used by pl.poznan.put.pdbClassDescriptionA set of methods that allow to address a residue by its chain name, residue number and insertion code.An experimental technique used to solve a structure (according to the PDB sources).Immutable implementation of
PdbAtomLine.Builds instances of typeImmutablePdbAtomLine.Immutable implementation ofPdbExpdtaLine.Builds instances of typeImmutablePdbExpdtaLine.Immutable implementation ofPdbHeaderLine.Builds instances of typeImmutablePdbHeaderLine.Immutable implementation ofPdbModresLine.Builds instances of typeImmutablePdbModresLine.Immutable implementation ofPdbNamedResidueIdentifier.Builds instances of typeImmutablePdbNamedResidueIdentifier.Immutable implementation ofPdbRemark2Line.Builds instances of typeImmutablePdbRemark2Line.Immutable implementation ofPdbRemark465Line.Builds instances of typeImmutablePdbRemark465Line.Immutable implementation ofPdbResidueIdentifier.Builds instances of typeImmutablePdbResidueIdentifier.Immutable implementation ofPdbTitleLine.Builds instances of typeImmutablePdbTitleLine.Representation of ATOM and HETATM lines in both PDB and mmCIF files.A representation of EXPDTA line in PDB files.A representation of HEADER file in PDB format.A representation of MODRES line in PDB format.Class that represents a residue identifier with a known name.A representation of REMARK 2 line which describes experimental resolution.A representation of REMARK 465 in PDB format which describes missing residues.A residue identifier is used only to address a residue in the structure.A representation of TITLE line in PDB format. -
Classes in pl.poznan.put.pdb used by pl.poznan.put.pdb.analysisClassDescriptionA set of methods that allow to address a residue by its chain name, residue number and insertion code.Representation of ATOM and HETATM lines in both PDB and mmCIF files.A representation of EXPDTA line in PDB files.A representation of HEADER file in PDB format.A representation of MODRES line in PDB format.Class that represents a residue identifier with a known name.A representation of REMARK 2 line which describes experimental resolution.A representation of REMARK 465 in PDB format which describes missing residues.A residue identifier is used only to address a residue in the structure.
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Classes in pl.poznan.put.pdb used by pl.poznan.put.rna
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Classes in pl.poznan.put.pdb used by pl.poznan.put.structureClassDescriptionClass that represents a residue identifier with a known name.
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Classes in pl.poznan.put.pdb used by pl.poznan.put.structure.formatsClassDescriptionClass that represents a residue identifier with a known name.A residue identifier is used only to address a residue in the structure.
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Classes in pl.poznan.put.pdb used by pl.poznan.put.torsion