Uses of Class
pl.poznan.put.pdb.analysis.ImmutableDefaultPdbModel.Builder

Packages that use ImmutableDefaultPdbModel.Builder

Package	Description
pl.poznan.put.pdb.analysis	Contains classes which work on data from PDB or mmCIF files.

Uses of ImmutableDefaultPdbModel.Builder in pl.poznan.put.pdb.analysis

Methods in pl.poznan.put.pdb.analysis that return ImmutableDefaultPdbModel.Builder

Modifier and Type	Method	Description
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.addAllAtoms(Iterable<? extends PdbAtomLine> elements)	Adds elements to atoms list.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.addAllChainTerminatedAfter(Iterable<? extends PdbResidueIdentifier> elements)	Adds elements to chainTerminatedAfter set.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.addAllMissingResidues(Iterable<? extends PdbRemark465Line> elements)	Adds elements to missingResidues list.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.addAllModifiedResidues(Iterable<? extends PdbModresLine> elements)	Adds elements to modifiedResidues list.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.addAtoms(PdbAtomLine element)	Adds one element to atoms list.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.addAtoms(PdbAtomLine... elements)	Adds elements to atoms list.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.addChainTerminatedAfter(PdbResidueIdentifier element)	Adds one element to chainTerminatedAfter set.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.addChainTerminatedAfter(PdbResidueIdentifier... elements)	Adds elements to chainTerminatedAfter set.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.addMissingResidues(PdbRemark465Line element)	Adds one element to missingResidues list.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.addMissingResidues(PdbRemark465Line... elements)	Adds elements to missingResidues list.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.addModifiedResidues(PdbModresLine element)	Adds one element to modifiedResidues list.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.addModifiedResidues(PdbModresLine... elements)	Adds elements to modifiedResidues list.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.atoms(Iterable<? extends PdbAtomLine> elements)	Sets or replaces all elements for atoms list.
static ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.builder()	Creates a builder for ImmutableDefaultPdbModel.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.chainTerminatedAfter(Iterable<? extends PdbResidueIdentifier> elements)	Sets or replaces all elements for chainTerminatedAfter set.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.experimentalData(PdbExpdtaLine experimentalData)	Initializes the value for the experimentalData attribute.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.from(AbstractPdbModel instance)	Fill a builder with attribute values from the provided pl.poznan.put.pdb.analysis.AbstractPdbModel instance.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.from(DefaultPdbModel instance)	Fill a builder with attribute values from the provided pl.poznan.put.pdb.analysis.DefaultPdbModel instance.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.from(PdbModel instance)	Fill a builder with attribute values from the provided pl.poznan.put.pdb.analysis.PdbModel instance.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.header(PdbHeaderLine header)	Initializes the value for the header attribute.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.missingResidues(Iterable<? extends PdbRemark465Line> elements)	Sets or replaces all elements for missingResidues list.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.modelNumber(int modelNumber)	Initializes the value for the modelNumber attribute.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.modifiedResidues(Iterable<? extends PdbModresLine> elements)	Sets or replaces all elements for modifiedResidues list.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.resolution(PdbRemark2Line resolution)	Initializes the value for the resolution attribute.
final ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.title(String title)	Initializes the value for the title attribute.