Package pl.poznan.put.rna

Interface Pyrimidine

All Superinterfaces:

NucleicAcidResidueComponent, Nucleobase, ResidueComponent, ResidueInformationProvider

public interface Pyrimidine
extends Nucleobase

A pyrimidine (cytosine, uracil or thymine).

Method Summary

Modifier and Type	Method	Description
default org.apache.commons.lang3.tuple.Pair<AtomName,AtomName>	edgeVectorAtoms(NucleobaseEdge edge)
default List<TorsionAngleType>	torsionAngleTypes()

Methods inherited from interface pl.poznan.put.rna.Nucleobase

edgeVector, moleculeType, nucleotideComponentType, standardReferenceFrame, standardReferenceFrameString

Methods inherited from interface pl.poznan.put.pdb.analysis.ResidueComponent

additionalAtoms, requiredAtoms

Methods inherited from interface pl.poznan.put.pdb.analysis.ResidueInformationProvider

aliases, defaultName, moleculeComponents, oneLetterName

Method Details

edgeVectorAtoms

default org.apache.commons.lang3.tuple.Pair<AtomName,AtomName> edgeVectorAtoms(NucleobaseEdge edge)

Specified by:

edgeVectorAtoms in interface Nucleobase

torsionAngleTypes

default List<TorsionAngleType> torsionAngleTypes()

Specified by:

torsionAngleTypes in interface ResidueInformationProvider

Returns:

The list of torsion angle types defined for this residue.