J. Blazewicz, F. Glover, M. Kasprzak,
"Evolutionary approaches to DNA sequencing with errors",
Annals of Operations Research 138, 2005, 67-78.
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Abstract:
In the paper, two evolutionary approaches to the general DNA sequencing problem,
assuming both negative and positive errors in the spectrum, are compared.
The older of them is based on the idea of genetic approach and is enhanced by
a greedy algorithm. The newly proposed algorithm combines the tabu search and
the scatter search methods. After conducting experiments with random and coding
DNA sequences, our results suggest that the tabu and scatter search algorithm
finds solutions of higher quality and more reliably than the genetic algorithm.
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3 Oct 2005