Conferences and seminars (talks, posters)


    2021

  1. 26.09-02.10.2021, ICOLE'20: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, talk;

  2. 15-17.09.2021, XIII Convention of the Polish Bioinformatics Society, Warsaw, Poland;

  3. 11-23.07.2021, RNA Benasque: Computational Approaches to RNA Structure and Function, Benasque, Spain;

  4. 04-08.07.2021, GO'20: XI International Colloquium on Graphs and Optimization, Spa, Belgium, talk "RNA clashes and punctures from an algorithmic perspective" (M. Szachniuk, M. Antczak, M. Popenda);

  5. 21.01.2021, Open lecture of Poznan University of Technology, Poland, talk "Applied bioinformatics: about folding, editing, and evaluation of RNA molecules in silico" (M. Szachniuk);

    6. 2020

  6. 08.12.2020, Seminar of the Laboratory of Algorithmics, Adam Mickiewicz University, Poland, talk "Graphs, pseudoknots and the hierarchy of RNA folding" (M. Szachniuk);

  7. 02-04.12.2020, 4th SICIM Workshop "Machine Learning meets Bioinformatics", Saxony Institute for Computational Intelligence and Machine Learning, Mittweida, Germany, talk "Computational methods for quadruplexes - an overview" (M. Szachniuk);

  8. 18.10.2020, Dagstuhl Seminar 20431 on Rational Design of RiboNucleic Acids, International Conference and Research Center for Computer Science, Schloss Dagstuhl, Germany;

  9. 20-26.09.2020, ICOLE'20: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, talk "On the way to improving the accuracy of RNA structure prediction" (M. Szachniuk);

  10. 16-18.09.2020, XIII Convention of the Polish Bioinformatics Society, Warsaw, Poland;

  11. 30-31.08.2020, 3D-Bioinfo Workshop "Geometry standards of nucleic acid structures", Prague, Czech Republic;

  12. 18-20.08.2020, 3rd RNA-Puzzles Meeting, Montreal, Canada;

  13. 05-09.07.2020, GO'20: XI International Colloquium on Graphs and Optimization, Spa, Belgium, talk "RNA clashes and punctures from an algorithmic perspective" (M. Szachniuk, M. Antczak, M. Popenda);

  14. 16.06.2020, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, co-authored talk "In silico exploration of quadruplex structures" (J. Miskiewicz, T. Zok, M. Popenda, J. Sarzynska, M. Szachniuk);

  15. 04-06.06.2020, ECCO 2020: 33rd Conference of the European Chapter on Combinatorial Optimization, St. Petersburg, Russia, co-authored talk "Combinatorial algorithms for high-resolution reconstruction of RNA 3D structures" (M. Antczak, T. Zok, M. Szachniuk);

  16. 04-06.06.2020, ECCO 2020: 33rd Conference of the European Chapter on Combinatorial Optimization, St. Petersburg, Russia, talk "Detection of knots in RNA structures" (M. Szachniuk, M. Popenda, D. Muzyka);

  17. 31.03.2020, Seminar of the Institute of Computing Science, Poznan University of Technology, Poland, talk "Everything you want to know about RNApolis" (M. Szachniuk);

  18. 11-12.02.2020, Polish Information Technology Olympics, Poznan, Poland, talk "What is bioinformatics" (M. Szachniuk);

    19. 2019

  19. 02-03.12.2019, 3rd SICIM Workshop "Machine Learning meets Bioinformatics", Saxony Institute for Computational Intelligence and Machine Learning, Mittweida, Germany, invited talk "Consensus-based evaluation and ranking of RNA models" (M. Szachniuk);

  20. 28-29.11.2019, AdvCompBio2019: Advances in Computational Biology, Barcelona, Spain, poster "ElTetrado captures topological features of nucleic acid quadruplexes" (M. Szachniuk, M. Popenda, T. Zok);

  21. 12-13.11.2019, Fascinating World of Bioorganic Chemistry, Poznan, Poland, invited talk "RNApolis opens the gates to G4s" (M. Szachniuk);

  22. 22-28.09.2019, ICOLE'19: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, talk "New method to classify quadruplex motifs" (M. Szachniuk, J. Miskiewicz, M. Popenda, J. Sarzynska, T. Zok);

  23. 19-21.09.2019, XII Convention of the Polish Bioinformatics Society, Cracow, Poland, co-authored talk "Secondary structure-based classification of nucleic acid quadruplexes" (J. Miskiewicz, M. Popenda, J. Sarzynska, T. Zok, M. Szachniuk);

  24. 19-21.09.2019, XII Convention of the Polish Bioinformatics Society, Cracow, Poland, co-authored talk "Machine learning approach for general quality assessment of tertiary RNA structures" (M. Zablocki, M. Szachniuk, M. Antczak);

  25. 06-09.09.2019, 7th International Meeting on Quadruplex Nucleic Acids, Changchun, China, co-authored talk "Automatic discovery of quadruplexes in DNA/RNA 3D structures" (T. Zok, J. Miskiewicz, P. Pielacinska, M. Szachniuk);

  26. 06-09.09.2019, 7th International Meeting on Quadruplex Nucleic Acids, Changchun, China, co-authored poster "ONZ as novel quadruplex classification" (J. Miskiewicz, M. Popenda, J. Sarzynska, T. Zok, M. Szachniuk);

  27. 27-29.06.2019, BIT'19: Bioinformatics in Torun, Torun, Poland, co-authored talk "General quality assessment of 3D RNA structures using machine learning techniques" (M. Zablocki, M. Antczak, M. Szachniuk);

  28. 23-26.06.2019, XXX EURO: 30th European Conference on Operational Research, Dublin, Ireland;

  29. 11-16.06.2019, RNA 2019: 24th Annual Meeting of the RNA Society, Cracow, Poland, talk "New classification of tetrads and quadruplexes in DNA and RNA structures" (M. Szachniuk, J. Miskiewicz, M. Popenda, J. Sarzynska, T. Zok);

  30. 11-16.06.2019, RNA 2019: 24th Annual Meeting of the RNA Society, Cracow, Poland, co-authored poster "Reference-free evaluation of RNA 3D models quality" (T. Zok, M. Zablocki, M. Antczak, M. Szachniuk);

  31. 11-16.06.2019, RNA 2019: 24th Annual Meeting of the RNA Society, Cracow, Poland, co-authored poster "RNApdbee 2.0: a web platform for comprehensive RNA structure annotation" (M. Antczak, T. Zok, M. Zurkowski, M. Popenda, J. Blazewicz, R.W. Adamiak, M. Szachniuk);

  32. 30.05-01.06.2019, ECCO 2019: 32nd Conference of the European Chapter on Combinatorial Optimization, St. Julian's, Malta, talk "Consensus-based approach to ranking similar objects" (M. Szachniuk, T. Zok, M. Zablocki, M. Antczak);

  33. 28.05.2019, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, co-authored talk "RNAtive - a consensus-based approach to rank RNA 3D models" (M. Zablocki, M. Antczak, T. Zok, M. Szachniuk);

  34. 14.05.2019, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, co-authored talk "New computational solutions in the quadruplex world" (J. Miskiewicz, T. Zok, P. Pielacinska, M. Popenda, J. Sarzynska, M. Szachniuk);

  35. 22.01.2019, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, co-authored talk "Bioinformatic study of RNA multi-branched loops" (J. Wiedemann, R.W. Adamiak, M. Szachniuk, M. Milostan);

    36. 2018

  36. 10-13.12.2018, 2nd SICIM Workshop "Machine Learning meets Bioinformatics", Saxony Institute for Computational Intelligence and Machine Learning, Mittweida, Germany, invited talk "Strengths and weaknesses of RNA folding simulation methods" (M. Szachniuk);

  37. 06-08.12.2018, 2nd RNA-Puzzles Meeting, Warsaw, Poland, talk "RNAComposer in modelling of RNA-Puzzles targets" (M. Szachniuk, J. Sarzynska);

  38. 29-30.11.2018, ICMBPS: International Conference on Medical, Biological and Pharmaceutical Sciences, Yangon, Myanmar, talk "Virtual RNA biology: from sequence to high quality 3D structure model" (M. Szachniuk, J. Blazewicz);

  39. 12-14.11.2018, International conference "Interdisciplinary Approaches to Complex Biological Systems" on the 30th anniversary of IBCh PAS, Poznan, Poland, talk "RNA structure modeling as bioinformatics challenge" (M. Szachniuk);

  40. 25-27.10.2018, Grand BIMSB Opening Symposium - 11th Berlin (Late) Summer Meeting "Computational and experimental biology meet", Berlin, Germany, poster "RNAComposer - prototyping and tuning of RNA 3D structures" (M. Szachniuk, M. Antczak, M. Popenda, T. Zok);

  41. 25-27.10.2018, Grand BIMSB Opening Symposium - 11th Berlin (Late) Summer Meeting "Computational and experimental biology meet", Berlin, Germany, co-authored poster "Recognizing native-like structure in the set of RNA 3D models" (T. Zok, M. Antczak, M. Szachniuk);

  42. 22.10.2018, Seminar of the Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland, talk "RNApolis: metody bioinformatyczne do badania struktur RNA" (M. Szachniuk);

  43. 23-29.09.2018, ICOLE'18: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, talk "Graph-based method for RNA structure remodeling" (M. Szachniuk, M. Antczak, T. Zok);

  44. 05-07.09.2018, XI Convention of the Polish Bioinformatics Society, Wroclaw, Poland, co-authored poster "Bioinformatic study of RNA multi-branched loops" (J. Wiedemann, M. Milostan, M. Szachniuk, R.W. Adamiak);

  45. 05-07.09.2018, XI Convention of the Polish Bioinformatics Society, Wroclaw, Poland, co-authored poster "G-quadruplex topology from bioinformatics perspective" (J. Miskiewicz, M. Popenda, J. Sarzynska, T. Zok, M. Szachniuk);

  46. 15-27.07.2018, RNA Benasque: Computational Approaches to RNA Structure and Function, Benasque, Spain, talk "RNA 2D/3D structure in RNApolis. There and Back Again" (M. Szachniuk, M. Antczak, T. Zok);

  47. 08-11.07.2018, XXIX EURO: 29th European Conference on Operational Research, Valencia, Spain, talk "Conflict graphs in pseudoknots modelling" (M. Szachniuk, T. Zok, K. Figurski, M. Popenda);

  48. 08-11.07.2018, XXIX EURO: 29th European Conference on Operational Research, Valencia, Spain, co-authored talk "N-way junction modeling and analysis" (J. Wiedemann, M. Milostan, M. Szachniuk, R.W. Adamiak);

  49. 08-11.07.2018, XXIX EURO: 29th European Conference on Operational Research, Valencia, Spain, co-authored talk "Computational analysis and visualization of G-quadruplex structures" (J. Miskiewicz, M. Popenda, J. Sarzynska, M. Antczak, M. Szachniuk);

  50. 28-30.06.2018, BIT'18: Bioinformatics in Torun, Torun, Poland, co-authored poster "Hierarchy of RNA folding reflected in the DBL encoding" (M. Antczak, M. Popenda, T. Zok, M. Zurkowski, R.W. Adamiak, Marta Szachniuk);

  51. 14-16.06.2018, ECCO 2018: 31st Conference of the European Chapter on Combinatorial Optimization, Fribourg, Switzerland, talk "RNA structure reparation with combinatorial algorithms" (M. Szachniuk, M. Antczak, T. Zok);

  52. 14-16.06.2018, ECCO 2018: 31st Conference of the European Chapter on Combinatorial Optimization, Fribourg, Switzerland, co-authored talk "N-way junction modeling and analysis" (J. Wiedemann, M. Milostan, M. Szachniuk, R.W. Adamiak);

  53. 14-16.06.2018, ECCO 2018: 31st Conference of the European Chapter on Combinatorial Optimization, Fribourg, Switzerland, co-authored talk "RNA pseudoknot analysis: a graph-coloring approach" (T. Zok, M. Antczak, M. Zurkowski, M. Popenda, J. Blazewicz, R.W. Adamiak, M. Szachniuk);

  54. 14-16.06.2018, ECCO 2018: 31st Conference of the European Chapter on Combinatorial Optimization, Fribourg, Switzerland, co-authored talk "Computational modeling and analysis of G-quadruplex structures" (J. Miskiewicz, M. Popenda, J. Sarzynska, M. Antczak, M. Szachniuk);

  55. 05.06.2018, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, co-authored talk "G-quadruples structures in human microRNA" (J. Miskiewicz, M. Popenda, J. Sarzynska, M. Szachniuk);

  56. 14-15.05.2018, Mittelerde-Meeting 2018: Central German Meeting on Bioinformatics, Mittweida, Germany, co-authored talk "On identification of local similarities between RNA structures in torsion angle space" (M. Milostan, J. Wiedemann, T. Zok, M. Szachniuk);

  57. 17-18.05.2018, RNA&Computing 2018: 1st Seminar on RNA and Computing, Biedrusko, Poland, talk "New challenges in structural bioinformatics" (M. Szachniuk);

  58. 21-24.04.2018, RECOMB'18: The 22nd Annual International Conference on Research in Computational Molecular Biology, Paris, France, co-authored poster "LCS-TA to identify similarity in molecular structures" (J. Wiedemann, T. Zok, M. Milostan, M. Szachniuk);

  59. 18-20.04.2018, RSBI 2018: 2nd Romanian Bioinformatics Seminars, Bucharest, Romania, invited talk "RNA structure modeling as bioinformatics challenge" (M. Szachniuk);

  60. 10.01.2018, 1st SICIM Workshop "Bioinformatics Meets Machine Learning", Saxony Institute for Computational Intelligence and Machine Learning, Mittweida, Germany, invited talk "RNApolis - bioinformatics solutions for RNA structural biology" (M. Szachniuk);

    61. 2017

  61. 31.10.2017, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, co-authored talk "LCS-TA to identify similar fragments in RNA 3D structures" (J. Wiedemann, T. Zok, M. Milostan, M. Szachniuk);

  62. 27-29.09.2017, X Convention of the Polish Bioinformatics Society, Uniejow, Poland, co-authored poster "Bioinformatics study of structural patterns in plant microRNA" (J. Miskiewicz, M. Szachniuk);

  63. 27-29.09.2017, X Convention of the Polish Bioinformatics Society, Uniejow, Poland, co-authored poster "LCS-TA to identify similarity in molecular structures" (J. Wiedemann, T. Zok, M. Milostan, M. Szachniuk);

  64. 27-29.09.2017, X Convention of the Polish Bioinformatics Society, Uniejow, Poland, co-authored talk "New approaches to determine RNA pseudoknot order" (T. Zok, M. Antczak, M. Popenda, M. Zurkowski, R.W. Adamiak, M. Szachniuk);

  65. 18-20.09.2017, EMBL-EBI seminar, European Bioinformatics Institute, Cambridge, UK, invited talk "Snapshots from RNApolis" (M. Szachniuk, M. Antczak);

  66. 14-15.09.2017, Code4Life Scientific: Data Science Algorithms, Techniques and Architectures in Healthcare, Poznan, Poland, invited talk "RNA modeling - on the way to molecular targeted therapy" (M. Szachniuk);

  67. 22-24.06.2017, BIT'17: Bioinformatics in Torun, Torun, Poland, co-authored talk "New approaches for determination of RNA pseudoknot order" (M. Antczak, M. Popenda, T. Zok, M. Szachniuk);

  68. 22-24.06.2017, BIT'17: Bioinformatics in Torun, Torun, Poland, co-authored poster "Bioinformatics study of structural patterns in plant microRNA" (J. Miskiewicz, M. Szachniuk);

  69. 21-22.05.2017, ORSIS 2017: Operations Research Society of Israel Conference, Tel Aviv, Israel, talk "RNA pseudoknots and graph coloring problem" (M. Szachniuk, M. Popenda, T. Zok);

  70. 03-06.05.2017, ECCO 2017: 30th Conference of the European Chapter on Combinatorial Optimization, Koper, Slovenia, talk "Pseudoknot order determination as graph coloring problem" (M. Szachniuk, T. Zok, M. Popenda);

  71. 03-06.05.2017, ECCO 2017: 30th Conference of the European Chapter on Combinatorial Optimization, Koper, Slovenia, co-authored talk "New algorithms to encode complex pseudoknotted RNA structures in extended dot-bracket notation" (M. Antczak, M. Popenda, T. Zok, M. Zurkowski, M. Szachniuk);

  72. 03-06.05.2017, ECCO 2017: 30th Conference of the European Chapter on Combinatorial Optimization, Koper, Slovenia, co-authored talk "LCS-TA to identify similarity in molecular structures" (J. Wiedemann, T. Zok, M. Milostan, M. Szachniuk);

    73. 2016

  73. 13-16.11.2016, INFORMS Annual Meeting 2016, Nashville, USA, poster "Finding constrained paths in edge colored graphs" (M. Szachniuk, G. Felici, G. Singh);

  74. 15-16.10.2016, 1st RNA-Puzzles Meeting, Strasbourg, France, co-authored talk, "RNA 3D structure prediction using RNAComposer" (R.W. Adamiak, M. Antczak, T. Zok, M. Szachniuk);

  75. 12-14.10.2016, Bilateral Retreat of IBCh PAS and Berlin Institute for Medical Systems Biology (BIMSB), Max Delbruck Centre for Molecular Medicine, Berlin, Germany, talk "RNApolis for RNA bioinformatics" (M. Szachniuk);

  76. 28-30.09.2016, IX Convention of the Polish Bioinformatics Society, Bialystok, Poland;

  77. 18-24.09.2016, ICOLE'16: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, talk "RNAComposer and RNA 3D structure prediction with fragment substitutions" (M. Szachniuk, M. Antczak, M. Popenda, T. Zok, J. Sarzynska, R.W. Adamiak);

  78. 18-24.09.2016, ICOLE'16: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, co-authored talk "Optimized algorithm for RNA pseudoknot classification" (M. Zurkowski, T. Zok, M. Szachniuk);

  79. 03-07.09.2016, ECCB'16: XV European Conference on Computational Biology, Hague, Netherlands, co-authored poster "New in silico approach to assessing RNA secondary structures with non-canonical base pairs" (N. Szostak, A.Rybarczyk, M. Antczak, T. Zok, M. Popenda, R.W. Adamiak, J. Blazewicz, M. Szachniuk);

  80. 13-16.09.2016, 2nd Congress BIO 2016 "Expanding beyond the limits", Wroclaw, Poland, co-authored poster "Bioinformatic analysis of motifs in microRNA vicinity in plants" (J.A. Kowalska, K. Tomczyk, J. Sarzynska, M. Szachniuk);

  81. 10-14.07.2016, GO'16: X International Colloquium on Graphs and Optimization, Mount Rigi, Switzerland, laudation for prof. Jacek Blazewicz (M. Szachniuk);

  82. 03-06.07.2016, XXVIII EURO: 28th European Conference on Operational Research, Poznan, Poland, talk "RNAComposer and 3D structure prediction with fragment substitutions" (M. Szachniuk, M. Antczak, T. Zok, J. Sarzynska, M. Popenda, R.W. Adamiak);

  83. 28.06-02.07.2016, 21st Annual Meeting of the RNA Society, Kyoto, Japan, co-authored poster "A consensus approach to evaluate RNA 3D models quality" (T. Zok, M. Antczak, P. Lukasiak, M. Szachniuk);

  84. 27-28.06.2016, Konferencja Uzytkownikow KDM 2016: W kierunku obliczen exaskalowych, Poznan, Poland, talk "Krotki przewodnik po RNApolis" (M. Szachniuk);

  85. 16-18.06.2016, BIT'16: Bioinformatics in Torun, Torun, Poland, co-authored poster "A consensus approach to evaluate RNA 3D models quality" (T. Zok, M. Antczak, P. Lukasiak, M. Szachniuk);

  86. 16-18.06.2016, BIT'16: Bioinformatics in Torun, Torun, Poland, co-authored poster "Application of new functionalities of RNAComposer to improve prediction accuracy" (M. Antczak, M. Popenda, T. Zok, J. Sarzynska, T. Ratajczak, R.W. Adamiak, M. Szachniuk);

  87. 16-18.06.2016, BIT'16: Bioinformatics in Torun, Torun, Poland, co-authored poster "Searching for structural patterns in the vicinity of microRNA in plants" (J.A. Kowalska, K. Tomczyk, A. Mickiewicz, J. Sarzynska, M. Szachniuk);

  88. 23.05.2016, Seminar of the Laboratory of Bioinformatics and Biophysics of Nanopores, Institute of Biomedical Engineering and Instrumentation, Wroclaw University of Technology, Wroclaw, Poland, invited talk "What a mess ... and how to assess the RNA secondary structure" (M. Szachniuk);

  89. 16.05.2016, Seminar of Computational Centre and Department of Bioinformatics, University of Bialystok, Bialystok, Poland, invited talk "From RNApolis towards understanding plant miRNA" (M. Szachniuk);

  90. 20.05.2016, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, co-authored talk "Bioinformatic analysis of motifs in the vicinity of plant microRNA" (J. Kowalska, K. Rybicka, A. Mickiewicz, J. Sarzynska, M. Szachniuk);

  91. 29.03-02.04.2016, XII seminar on New Challenges in Scheduling Theory, Aussois, France, co-authored talk "Scheduling Models and Algorithms for the Orderly Colored Longest Paths" (G. Felici, G. Singh, M. Szachniuk);

  92. 21-24.03.2016, ICGEB Workshop on RNA Structure and Function, Trieste, Italy, co-authored poster "Bioinformatic analysis of motifs in plant microRNA" (K. Rybicka, J. Kowalska, A. Mickiewicz, J. Sarzynska, M. Szachniuk);

    93. 2015

  93. 22.12.2015, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, talk "New concepts for OCLP" (M. Szachniuk);

  94. 17-19.09.2015, VIII Convention of the Polish Bioinformatics Society, Lublin, Poland, co-authored talk "New in silico approach to assess RNA secondary structures with non-canonical base pairs" (N. Szostak, A. Rybarczyk, M. Antczak, T. Zok, M. Popenda, R.W. Adamiak, J. Blazewicz, M. Szachniuk);

  95. 17-19.09.2015, VIII Convention of the Polish Bioinformatics Society, Lublin, Poland, co-authored poster "Constructing a library of 3D RNA conformations" (T. Zok, M. Antczak, M. Riedel, D. Nebel, T. Villmann, P. Lukasiak, J. Blazewicz, M. Szachniuk);

  96. 19-31.07.2015, RNA Benasque: Computational Analysis of RNA Structure and Function, Benasque, Spain, talk "RNApolis for RNA structure analysis. From 2D to 3D structure and back." (M. Szachniuk);

  97. 12-15.07.2015, XXVII EURO: 27th European Conference on Operational Research, Glasgow, UK, talk "Disjoint pathways in NMR-based graphs" (M. Szachniuk*, L. Popenda);

  98. 28-30.05.2015, ECCO 2015: 28th Conference of the European Chapter on Combinatorial Optimization, Catania, Italy, talk "Applications of RNA trigonometric model" (M. Szachniuk*, T. Zok, M. Antczak);

  99. 28-30.05.2015, ECCO 2015: 28th Conference of the European Chapter on Combinatorial Optimization, Catania, Italy, co-authored talk "New in silico approach to assess RNA secondary structures with non-canonical base pairs" (N. Szostak, A. Rybarczyk, M. Antczak, T. Zok, M. Popenda, R.W. Adamiak, J. Blazewicz, M. Szachniuk);

  100. 10-13.05.2015, MultiPole-2: Multi-Pole Approach to Structural Science, Warsaw, Poland, invited talk "RNApdbee and assessing the RNA secondary structure";

  101. 16-18.04.2015, BIT'15: Bioinformatics in Torun, Torun, Poland, co-authored poster "Bioinformatic analysis of motifs in plant microRNA structures" (J. Kowalska, K. Rybicka, A. Mickiewicz, J. Sarzynska, M. Szachniuk);

  102. 16-18.04.2015, BIT'15: Bioinformatics in Torun, Torun, Poland, co-authored poster "Selected aspects of RNA structure processing in trigonometric space" (T. Zok, M. Antczak, M. Szachniuk);

  103. 12-15.04.2015, RECOMB'15: The 19th Annual International Conference on Research in Computational Molecular Biology, Warsaw, Poland, co-authored poster "Accurate prediction of nucleotide conformations" (M. Antczak, T. Zok, M. Riedel, D. Nebel, P. Lukasiak, M. Szachniuk, T. Villmann, J. Blazewicz);

  104. 12-15.04.2015, RECOMB'15: The 19th Annual International Conference on Research in Computational Molecular Biology, Warsaw, Poland, co-authored poster "Sorting signals targeting mRNA into hepatic extracellular vesicles" (N. Szostak, A. Rybarczyk, M. Szachniuk, J. Blazewicz);

  105. 12-15.04.2015, RECOMB'15: The 19th Annual International Conference on Research in Computational Molecular Biology, Warsaw, Poland, co-authored poster "RNApdbee - secondary structure retrieval from knotted and unknotted RNA structures" (T. Zok, M. Antczak, M. Popenda, P. Lukasiak, R.W. Adamiak, J. Blazewicz, M. Szachniuk);

  106. 25-30.01.2015, AIRO Winter 2015 Conference: Modelling the Externalities, Champoluc, Aosta, Italy, talk "On trigonometric representation of RNA 3D structure and its applications." (M. Szachniuk*, T. Zok, M. Antczak);

    107. 2014

  107. 27-31.10.2014, META'14: The 5th International Conference on Metaheuristics and Nature Inspired Computing, Marrakech, Morocco, talk "Integer Programming formulations for NMR-derived assignment problem" (M. Szachniuk*, M.C. De Cola, G. Felici, J. Blazewicz);

  108. 21.10.2014, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, co-authored talk "A database of RNA rotamers and its applications" (T. Zok*, M. Antczak, P. Lukasiak, M. Szachniuk);

  109. 06-10.10.2014, V Polish-Italian Workshop on Bioinformatics: Models and Algorithms for Bioinformatics, Rome, Italy, talk "Optimization problems in RNA structure modeling" (M. Szachniuk);

  110. 14-20.09.2014, ICOLE'14: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, talk "Pseudoknot annotation method for RNAs" (M. Szachniuk*, T. Zok, M. Popenda);

  111. 09-12.09.2014, BIO 2014: 1st Congress of the Polish Biochemistry, Cell Biology, Biophysics and Bioinformatics, Warsaw, Poland;

  112. 07-10.09.2014, ECCB'14: XIII European Conference on Computational Biology, Strasbourg, France, co-authored poster "Accurate approach for nucleotide conformation prediction of RNAs" (M. Antczak*, T. Zok*, M. Riedel, D. Nebel, P. Lukasiak, M. Szachniuk, T. Villmann, J. Blazewicz);

  113. 24-28.08.2014, XXI Roundtable on Nucleosides, Nucleotides and Nucleic Acids, Poznan, Poland, co-authored poster "New web-server based tools for studying RNA structure" (K.J. Purzycka, M. Popenda, M. Szachniuk, P. Lukasiak, M. Antczak, T. Zok, T. Ratajczak, J. Blazewicz, R.W. Adamiak);

  114. 06-10.07.2014, GO'14: IX International Colloquium on Graphs and Optimization, Sirmione, Italy, talk "Bio-inspired graph problems" (M. Szachniuk);

  115. 26-28.06.2014, Mini EURO Conference on Computational Biology, Bioinformatics and Medicine, Poznan, Poland, co-authored talk "Orderly colored paths for the RNA assignment problem in 3D NMR spectra" (M.C. De Cola*, G. Felici, M. Szachniuk);

  116. 12-14.06.2014, BIT'14: Bioinformatics in Torun, Torun, Poland, co-authored poster "RNApdbee: from RNA atom coordinates to the secondary structure" (T. Zok*, M. Antczak, M. Popenda, P. Lukasiak, R.W. Adamiak, J. Blazewicz, M. Szachniuk);

  117. 12-14.06.2014, BIT'14: Bioinformatics in Torun, Torun, Poland, co-authored poster "RNA rotamer library for coarse-grained model refinement" (M. Antczak*, T. Zok, P. Lukasiak, J. Blazewicz, M. Szachniuk);

  118. 12-14.06.2014, BIT'14: Bioinformatics in Torun, Torun, Poland, invited talk "An algorithm to extract RNA secondary topology from the 3D structure" (M. Szachniuk and T. Zok);

  119. 27.05.2014, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, co-authored talk "RNAlyzer - web server for computational quality evaluation of RNAs" (T. Ratajczak*, M. Antczak, M. Szachniuk, J. Blazewicz, P. Lukasiak);

  120. 29.04.2014, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, co-authored talk "Sorting signals targeting mRNA into hepatic extracellular vesicles" (N. Szostak*, F. Royo, A. Rybarczyk, M. Szachniuk, J. Blazewicz, A. del Sol, J.M. Falcon-Perez);

  121. 28.01.2014, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, co-authored talk "An algorithm to extract RNA secondary topology from the 3D structure" (T. Zok*, M. Antczak, M. Popenda, M. Szachniuk, P. Lukasiak, J. Blazewicz);

    122. 2013

  122. 27-29.11.2013, CMLS-13: International Symposium on Computational Models for Life Sciences, Sydney, Australia, poster "Turning data into folds using RNAComposer" (M. Szachniuk*, J. Sarzynska, M. Popenda, J. Blazewicz);

  123. 24-26.11.2013, Seminar of Modelling, Optimisation and Simulation Group, CSIRO Mathematics, Informatics and Statistics, South Clayton, Australia, invited talk "The orderly colored longest path problem and its applications in bioinformatics" (M. Szachniuk*, M.C. De Cola, G. Felici);

  124. 12-14.11.2013, Towards a New RNA World conference, IBCh PAS, Poznan, Poland, talk "Computing in the RNA world. From RNA FRABASE to RNAComposer" (M. Szachniuk);

  125. 21-22.10.2013, 2nd International Systems Biomedicine Symposium, Campus Belval, Luxembourg, co-authored poster "RNA rotamer library for coarse-grained model refinement" (T. Zok*, M. Antczak, P. Lukasiak, J. Blazewicz, M. Szachniuk);

  126. 01-06.10.2013, ICOLE'13: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, talk "The orderly colored longest path problem and its applications" (M. Szachniuk*, M. De Cola, G. Felici, J. Blazewicz);

  127. 01-06.10.2013, ICOLE'13: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, co-authored talk "A search in RNA conformational space. Building a library of nucleotide rotamers." (T. Zok*, M. Antczak, P. Lukasiak, J. Blazewicz, M. Szachniuk);

  128. 27-29.09.2013, VI Convention of the Polish Bioinformatics Society, Wroclaw, Poland;

  129. 01-04.07.2013, XXVI EURO-INFORMS: 26th European Conference on Operational Research, Rome, Italy, talk "Optimal pathway reconstruction on NMR maps" (M. Szachniuk*, M. Malaczynski, E. Pesch, J. Blazewicz);

  130. 04.06.2013, Seminar of the Institute of Computing Science, Poznan University of Technology, Poland, talk "Combinatorial and algorithmic issues in RNA bioinformatics" (M. Szachniuk);

  131. 30.05-01.06.2013, ECCO 2013: 26th Conference of the European Chapter on Combinatorial Optimization, Paris, France, talk "Edge colored graphs and NMR maps" (M. Szachniuk*, M. De Cola, G. Felici);

  132. 08-10.05.2013, ISORAP'13: International Symposium on Operational Research and Applications, Marrakesh, Morocco, talk "IP solutions to the problem of routing along NMR peaks" (M. Szachniuk*, M. De Cola, G. Felici, J. Blazewicz);

  133. 24-29.03.2013, BIOTECHNO 2013: 5th International Conference on Bioinformatics, Biocomputational Systems and Biotechnologies, Lisbon, Portugal, co-authored poster "Comparison of multiple structures in torsion angle space" (T. Zok*, M. Popenda, M. Szachniuk);

    134. 2012

  134. 23.11.2012, Seminar of the Theoretical Molecular Biophysics Group, Institute of Physics, Nicholas Copernicus University, Torun, Poland, invited talk "Co widac w szklanej kuli, czyli o przewidywaniu struktury RNA" (M. Szachniuk);

  135. 27-31.10.2012, META'12: The 4th International Conference on Metaheuristics and Nature Inspired Computing, Port El Kantaoui, Sousse, Tunisia, talk "A metaheuristic approach to disjoint NOE pathways reconstruction" (M. Szachniuk*, M. Malaczynski, J. Blazewicz);

  136. 01-07.10.2012, ICOLE'12: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, talk "Multitouch interface to edit RNA 2D structures" (M. Szachniuk*, K. Janas);

  137. 27-29.09.2012, BIT'12: Bioinformatics in Torun, Torun, Poland, co-authored poster "Bioinformatics in the Monitoring of Molecule Conformational Changes" (T. Zok*, M. Szachniuk, J. Blazewicz);

  138. 13-15.09.2012, Mini EURO Conference on Computational Biology, Bioinformatics and Medicine, Nottingham, UK, talk "Solving RNA puzzle: strategies, milestones and constraints" (M. Szachniuk*, M. Antczak, M. Popenda);

  139. 13-15.09.2012, Mini EURO Conference on Computational Biology, Bioinformatics and Medicine, Nottingham, UK, co-authored talk "Integer Programming Models for RNA Tertiary Structure Reconstruction" (M. De Cola, G. Felici*, M. Szachniuk, J. Blazewicz);

  140. 11-14.09.2012, Polish-German Biochemical Societies Joint Meeting, Poznan: Biochemistry for Health and Environment, Poznan, Poland, co-authored talk "RNAComposer: automated high-resultion structure prediction for large RNAs" (M. Popenda, M. Szachniuk, M. Antczak, K.J. Purzycka, P. Lukasiak, N. Bartol, J. Blazewicz, R.W. Adamiak*);

  141. 04-07.09.2012, AIRO 2012: The 43rd Annual Conference of the Italian Operational Research Society, Vietri Sur Mare, Italy, co-authored talk "The orderly colored longest path problem" (M. De Cola, G. Felici*, M. Szachniuk);

  142. 13-17.08.2012, GO'12: VIII International Colloquium on Graphs and Optimization, Leukerbad, Switzerland, talk "Transfer pathway reconstruction in NMR graphs" (M. Szachniuk);

  143. 16-20.07.2012, ORP3, Linz, Austria, co-authored talk "The orderly colored longest path problem" (M. De Cola*, G. Felici, M. Szachniuk);

  144. 25-27.05.2012, V Convention of the Polish Bioinformatics Society, Gdansk, Poland, co-authored talk "Ins and outs of RNA structure comparison in two metric spaces" (T. Zok*, M. Szachniuk, M. Popenda, J. Blazewicz);

  145. 15-16.05.2012, BIOCONNECT 2012: Business Meets Science to cooperate in current topics, Poznan, Poland, poster "RNAComposer - breaking the limits in prediction of large RNA 3D structures" (M. Szachniuk*, M. Popenda, M. Antczak, K.J. Purzycka, P. Lukasiak, N. Bartol, J. Blazewicz, R.W. Adamiak);

  146. 15-16.05.2012, BIOCONNECT 2012: Business Meets Science to cooperate in current topics, Poznan, Poland, co-authored poster "Novel approach to quality analysis of RNA structural models" (P. Lukasiak*, T. Ratajczak, M. Antczak, J. Blazewicz, M. Szachniuk, R.W. Adamiak, M. Popenda);

  147. 08.05.2012, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, co-authored talk "Computing science instrumentation for tracing molecule structural changes" (T. Zok*, M. Szachniuk);

  148. 26-28.04.2012, ECCO 2012: 25th Conference of the European Chapter on Combinatorial Optimization, Antalya, Turkey, co-authored talk "The tool for automatic prediction of RNA tertiary structures" (J. Blazewicz*, M. Popenda, M. Antczak, M. Szachniuk, P. Lukasiak, R. Adamiak, N. Bartol, K. Purzycka);

  149. 13.03.2012, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, co-authored talk "European Center for Bioinformatics and Genomics - aims and perspectives" (J. Blazewicz*, M. Szachniuk, M. Marcinkowska);

  150. 19-20.01.2012, New Frontiers in Structural Biology, Poznan, Poland, co-authored talk "Similar or not? How to compare structures using MCQ" (T. Zok*, M. Popenda, M. Szachniuk);

    151. 2011

  151. 24-26.11.2011, XVI Sympozjum Sekcji Kardiologii Eksperymentalnej Polskiego Towarzystwa Kardiologicznego, Poznan, Poland, invited plenary talk "Bioinformatyka w poznawaniu struktury RNA" (M. Szachniuk);

  152. 16-19.11.2011, MultiPole-1: Multi-Pole Approach to Structural Biology, Warsaw, Poland, poster "RNA FRABASE - a database for RNA structures" (M. Szachniuk*, M. Popenda, M. Blazewicz, S. Wasik, E.K. Burke, J. Blazewicz, R.W. Adamiak);

  153. 16-19.11.2011, MultiPole-1: Multi-Pole Approach to Structural Biology, Warsaw, Poland, co-authored talk "RNA Composer - an automatic tool for RNA tertiary structure prediction" (M. Popenda, M. Szachniuk, M. Antczak, K.J. Purzycka, P. Lukasiak, N. Bartol, J. Blazewicz*, R.W. Adamiak);

  154. 19-26.10.2011, III Polish-Italian Workshop on Bioinformatics: Models and algorithms for bioinformatics, Rome, Italy, talk "Summary of NMR data theoretical analysis" (M. Szachniuk);

  155. 30.09-02.10.2011, IV Convention of the Polish Bioinformatics Society, Krakow, Poland;

  156. 18-24.09.2011, ICOLE'11: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, talk "Snapshots from a theoretical study on the assignment problem" (M. Szachniuk, M. De Cola, G. Felici);

  157. 15-16.09.2011, Polish-Luxembourg Workshop on Informatics, Poznan, Poland, talk "Bioinformatic solutions for RNA study" (M. Szachniuk);

  158. 25.07.2011, Seminar of Modelling, Optimisation and Simulation Group, CSIRO Mathematics, Informatics and Statistics, South Clayton, Australia, invited talk "OR for 3D RNA structure modeling" (M. Szachniuk);

  159. 18-21.07.2011, Workshop on Mathematical aspects of biological systems, Wellington, New Zealand, talk "OR for RNA three-dimensional structure modeling" (M. Szachniuk);

  160. 10-15.07.2011, IFORS 2011: 19th Triennial Conference of the International Federation of Operational Research Societes, Melbourne, Australia, talk "RNA structure prediction from OR perspective" (M. Szachniuk);

  161. 30.05-01.06.2011, ECCO 2011: 24th Conference of the European Chapter on Combinatorial Optimization, Amsterdam, Netherlands, talk "Resonance assignment problem computational complexity" (M. Szachniuk*, D. de Werra, J. Blazewicz);

    162. 2010

  162. 09.11.2010, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, talk "RNAComposer & the art of composing RNA structures" (M. Szachniuk*, M. Popenda, M. Antczak, K.J. Purzycka, P. Lukasiak, N. Bartol, J. Blazewicz, R.W. Adamiak);

  163. 11-17.10.2010, II Polish-Italian Workshop on Bioinformatics: Models and algorithms for bioinformatics, Rome, Italy, talk "Advances in the analysis of 3D NMR spectra of biomolecules" (M. Szachniuk);

  164. 12.10.2010, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, talk "Comparison of RNA structures in torsional angle space" (T. Zok*, M. Szachniuk, M. Antczak);

  165. 01-03.10.2010, III Convention of the Polish Bioinformatics Society, Ustron, Poland;

  166. 26.09-03.10.2010, ICOLE'10: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, talk "RNAComposer: the art of composing RNA structures" (M. Szachniuk*, M. Popenda, M. Antczak, K.J. Purzycka, P. Lukasiak, J. Blazewicz, R.W. Adamiak); book of abstracts;

  167. 26.09-03.10.2010, ICOLE'10: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, co-authored talk "Comparison of RNA structures in torsional angle space" (T. Zok*, M. Szachniuk, M. Antczak); book of abstracts;

  168. 16-18.08.2010, EURASNET Interdisciplinary Focus Meeting: Frontiers in Structural Biology of RNAs and RNPs, Poznan, Poland, poster "RNA FRABASE 2.0 for the exploration of RNA structure parameter space" (M. Szachniuk*, M. Popenda, M. Blazewicz, S. Wasik, E.K. Burke, J. Blazewicz, R.W. Adamiak);

  169. 16-18.08.2010, EURASNET Interdisciplinary Focus Meeting: Frontiers in Structural Biology of RNAs and RNPs, Poznan, Poland, co-authored poster "Validation of RNA models by a novel method based on local descriptors approach" (P. Lukasiak*, M. Wojciechowski, M. Antczak, M. Szachniuk, J. Blazewicz);

  170. 16-18.08.2010, EURASNET Interdisciplinary Focus Meeting: Frontiers in Structural Biology of RNAs and RNPs, Poznan, Poland, co-authored talk "RNAComposer: a method and server for large-scale automated modeling of RNA tertiary structures" (M. Popenda, M. Szachniuk, M. Antczak, K.J. Purzycka, P. Lukasiak, J. Blazewicz, R.W. Adamiak*);

  171. 12-15.08.2010, RECOMB'10: The 14th Annual International Conference on Research in Computational Molecular Biology, Lisbon, Portugal, poster "RNA FRABASE 2.0. An intelligent tool for the exploration of RNA structure parameter space" (M. Szachniuk*, M. Popenda, M. Blazewicz, S. Wasik, E.K. Burke, J. Blazewicz, R.W. Adamiak);

  172. 11-14.07.2010, EURO XXIV: 24th European Congress on Operational Research, Lisbon, Portugal, talk "Manhattan Hamiltonian Path in NMR study" (M. Szachniuk);

  173. 05-08.07.2010, I Polish-Italian Workshop on Bioinformatics: Advanced bioinformatic algorithms in molecular biology, Poznan, Poland, talk "An analysis of RNA structures" (M. Szachniuk);

  174. 24-26.03.2010, The 2nd Conference of the Polish Mass Spectrometry Society, Poznan, Poland;

  175. 18-19.02.2010,  Annual Meeting of the Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland, poster "RNA FRABASE 2.0: an advanced web-accessible database with the capacity to search the 3D fragments within RNA structures" (M. Szachniuk*, M. Popenda, M. Blazewicz, S. Wasik, E.K. Burke, J. Blazewicz, R.W. Adamiak);

    176. 2009

  176. 06.10.2009, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, co-authored talk "Neural network based approach to NMR sequential assignment for RNAs" (M. Malaczynski*, M. Szachniuk);

  177. 2-4.10.2009, II Convention of the Polish Bioinformatics Society, Bedlewo, Poland;

  178. 05-08.07.2009, EURO XXIII: 23rd European Congress on Operational Research, Bonn, Germany, talk "RNA structure determination via NMR: automated processing of spectral data" (M. Szachniuk*, M. Popenda, L. Popenda);

  179. 24-30.05.2009, ICOLE'09: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, talk "Graphs in NMR analysis of RNAs" (M. Szachniuk*, M. Popenda, L. Popenda); book of abstracts;

  180. 30.03-02.04.2009, CIBCB'09: 2009 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, Nashville, Tennessee, USA, talk "An assignment walk through 3D NMR spectrum" (M. Szachniuk*, M. Popenda, J. Blazewicz);

  181. 10-11.02.2009,  Annual Meeting of the Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland, poster "Automated sequential assignment in 3D NMR spectra of RNAs" (M. Szachniuk*, M. Popenda);

    182. 2008

  182. 3-5.10.2008, I Convention of the Polish Bioinformatics Society, Jadwisin, Poland;

  183. 22-26.09.2008, ECCB'08: European Conference on Computational Biology, Cagliari, Sardinia-Italy, poster "Automated sequential assignment in 3D NMR spectra of RNAs" (M. Szachniuk*, M. Popenda);

  184. 15-17.09.2008, Mini EURO Conference on Computational Biology, Bioinformatics and Medicine, Rome, Italy, talk "Graph models in NMR structural analysis" (M. Szachniuk);

  185. 15-17.09.2008, Mini EURO Conference on Computational Biology, Bioinformatics and Medicine, Rome, Italy, co-authored talk "A bioinformatic system for marine metagenomic data retrieval from scientific papers" (A. Rybarczyk*, M. Radom, P. Formanowicz, M. Szachniuk, J. Blazewicz);

  186. 08-14.06.2008, ICOLE'08: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, talk "From document processing to an identification of marine microorganisms' habitat specificity" (M. Szachniuk*, M. Radom, A. Rybarczyk, P. Formanowicz, J. Blazewicz); book of abstracts;

  187. 08-14.06.2008, ICOLE'08: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, co-authored talk "Comparison of RNA structures - concepts and measures" (T. Zok*, M. Popenda, M. Szachniuk); book of abstracts;

  188. 08-14.06.2008, ICOLE'08: Perspectives of Bioinformatics, Operations Research and Machine Learning, Lessach, Austria, co-authored talk "3D-RNA-Pred: an automatic building of the three-dimensional RNA structures" (M. Antczak*, J. Blazewicz, R.W. Adamiak, P. Lukasiak, M. Popenda, M. Szachniuk, G. Palik); book of abstracts;

  189. 05-06.06.2008,  Annual Meeting of the Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland, poster "RNA FRABASE - design and implementation" (M. Blazewicz, M. Popenda, M. Szachniuk*, R.W. Adamiak);

  190. 05-06.06.2008,  Annual Meeting of the Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland, poster "RNA FRABASE ver 1.0. An engine with a database to search for the three-dimensional fragments within RNA structures" (M. Szachniuk*, M. Popenda, M. Blazewicz, R.W. Adamiak);

  191. 20-23.05.2008, EurOPT'08: Mini EURO Conference on Continuous Optimization and Knowledge-Based Technologies, Neringa, Lithuania, invited plenary talk "OR in RNA structure analysis" (M. Szachniuk);

  192. 20-23.05.2008, EurOPT'08: Mini EURO Conference on Continuous Optimization and Knowledge-Based Technologies, Neringa, Lithuania, co-authored talk "An insight into microorganisms' adaptation to marine environment via automated analysis of the literature" (M. Radom*, A. Rybarczyk, P. Formanowicz, M. Szachniuk, J. Blazewicz);

  193. 24-27.04.2008, Bioinformatics 2008, Warsaw, Poland, poster "An analysis of transfer pathway reconstruction problem in multidimensional NMR spectra" (M. Szachniuk*, M. Popenda, L. Popenda, J. Blazewicz);

  194. 24-27.04.2008, Bioinformatics 2008, Warsaw, Poland, co-authored poster "Detection of habitat specific gene patterns in Metafunctions EU project" (M. Radom*, A. Rybarczyk, P. Formanowicz, M. Szachniuk, J. Blazewicz);

  195. 30.03-02.04.2008, RECOMB'08: The 12th Annual International Conference on Research in Computational Molecular Biology, Singapore, poster "Constructing transfer pathways in multidimensional NMR spectra of RNAs" (M. Szachniuk*, M. Popenda, L. Popenda, J. Blazewicz);

  196. 30.03-02.04.2008, RECOMB'08: The 12th Annual International Conference on Research in Computational Molecular Biology, Singapore, poster "On the design of RNA fragments structural database" (M. Szachniuk*, M. Blazewicz, M. Popenda, R.W. Adamiak);

    197. 2007

  197. 17-18.12.2007, The First Conference on Synthetic Biology, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland;

  198. 20.11.2007, Seminar of  the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, co-authored talk "Metafunctions EU project: detecting functions of habitat specific gene patterns" (A. Rybarczyk*, M. Radom, P. Formanowicz, J. Blazewicz, M. Szachniuk);

  199. 06.11.2007, Seminar of  the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, talk "Project of RNA fragments database" (M. Szachniuk*, M. Blazewicz, M. Popenda, R.W. Adamiak);

  200. 15.10.2007, Seminar of  the Institute of Mathematics, Polish Academy of Sciences, Warsaw, Poland, invited talk "O rozwiązywaniu i wyszukiwaniu struktur przestrzennych fragmentów RNA" (M. Szachniuk);

  201. 05-06.10.2007, COMBI'07: 5th Workshop on Bioinformatics, Uniejow, Poland, talk "Analysis of resonance assignment in 3D NMR spectra" (M. Szachniuk*, M. Popenda, S. Klemczak);

  202. 08-11.07.2007, EURO XXII: 22nd European Congress on Operational Research, Prague, Czech Republic, talk "Structural information retrieval from NMR spectra of RNA molecules" (M. Szachniuk*, L. Popenda, M. Milawski, W. Paczkowski); book of abstracts;

  203. 27.05-03.06.2007, ICOLE'07: Bioinformatics, Operations Research and Machine Learning: Recent Trends and Developments, Lessach, Austria, talk "Strategies of signal assignment in NMR spectra of RNAs with different structural motifs" (M. Szachniuk*, M. Popenda, L. Popenda); book of abstracts;

  204. 27.05-03.06.2007, ICOLE'07: Bioinformatics, Operations Research and Machine Learning: Recent Trends and Developments, Lessach, Austria, co-authored talk "A new tool for fundamental analysis of NMR spectra" (W. Paczkowski*, M. Milawski, L. Popenda, M. Szachniuk); book of abstracts;

  205. 27.05-03.06.2007, ICOLE'07: Bioinformatics, Operations Research and Machine Learning: Recent Trends and Developments, Lessach, Austria, co-authored talk "Project of RNA fragments database" (M. Blazewicz*, M. Popenda, R.W. Adamiak, M. Szachniuk); book of abstracts;

  206. 01-02.03.2007, Annual Meeting of the Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland, poster "RNA FRABASE - baza danych dla wyszukiwania struktur przestrzennych zdefiniowanych fragmentów RNA" (M. Szachniuk*, M. Popenda, M. Blazewicz, R.W. Adamiak);

    207. 2006

  207. 06-07.10.2006,  4th Workshop on Bioinformatics, The Jadwisin Palace, Jadwisin, Poland;

  208. 11-13.09.2006, IInd Symposium: Nuclear Magnetic Resonance in Chemistry, Biology and Medicine, Warszawa, Poland, poster "Algorithmic Approach to NOE Pathway Reconstruction in 2D-NOESY Spectra of RNA Molecules" (M. Szachniuk*, M. Popenda, L. Popenda, Z. Gdaniec, J. Blazewicz, R.W. Adamiak);

  209. 02-05.07.2006, EURO XXI: 21st European Conference on Operational Research, Reykjavik, Iceland, talk "Combinatorial Analysis of 2D-NOESY Spectra in Nuclear Magnetic Resonance Spectroscopy of RNA Molecules" within EDDA competition (M. Szachniuk); book of abstracts;

  210. 17.05.2006, Szkola Spektroskopii NMR, Lodz University, Lodz, Poland;

  211. 02-03.03.2006, Annual Meeting of the Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland, talk "Zastosowanie algorytmu tabu search do analizy widm NMR wybrzuszonych dupleksow RNA" (M. Szachniuk);

    212. 2005

  212. 01-02.12.2005, XXXVIII Polish Seminar on Nuclear Magnetic Resonance and Its Applications, The Henryk Niewodniczanski Institute of Nuclear Physics, Polish Academy of Sciences, Cracow, Poland, poster "Zastosowanie algorytmu tabu search do konstruowania sciezek NOE na widmach 2D NOESY wybrzuszonych dupleksow RNA" (M. Szachniuk*, L. Popenda, Z. Gdaniec, R.W. Adamiak, J. Blazewicz); book of abstracts;

  213. 14-15.11.2005, CIBCB'05: 2005 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, La Jolla, California, USA, talk "NMR analysis of RNA bulged structures: tabu search application to NOE signal assignment" (M. Szachniuk*, L. Popenda, Z. Gdaniec, R.W. Adamiak, J. Blazewicz);

  214. 30.10-04.11.2005, Dagstuhl Seminar 05441 on Managing and Mining Genome Information: Frontiers in Bioinformatics, International Conference and Research Center for Computer Science, Schloss Dagstuhl, Germany, talk "On some graph problems arising in RNA 3D structure determination process with NMR” (M. Szachniuk); book of abstracts;

  215. 14-15.10.2005, 3rd Workshop on Bioinformatics, Mathematical Research and Conference Center, Bedlewo, Poland, talk "Zastosowanie algorytmu tabu search do analizy widm NMR wybrzuszonych dupleksow RNA" (M. Szachniuk*, L. Popenda);

  216. 31.05.2005, Public presentation and defence of Ph.D. thesis on "Combinatorial Analysis of 2D-NOESY Spectra in Nuclear Magnetic Resonance Spectroscopy of RNA Molecules", Poznan University of Technology, Poland;

  217. 10-11.03.2005, Annual Meeting of the Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland, poster "An algorithm for an automatic NOE pathways analysis of 2D NMR spectra of RNA duplexes"(M. Szachniuk*, M. Popenda, R.W. Adamiak, J. Blazewicz);

  218. 30.01-06.02.2005, ICOLE'05: International Workshop on Scheduling and Sequencing, Lessach, Austria, talk "Computational aspects of RNA tertiary structure determination with NMR techniques" (M. Szachniuk);

    219. 2004

  219. 12-15.10.2004, Seminar of the Protein Structure Prediction Center in Lawrence Livermore National Laboratory, Livermore, California, USA, talk "RNA structural analysis with NMR - application of metaheuristics in the resonance assignment" (M. Szachniuk*, A. Wojtowicz, J. Blazewicz);

  220. 07-08.10.2004, CIBCB'04: 2004 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, La Jolla, California, USA, talk "Evolutionary approach to NOE paths assignment in RNA structure elucidation" (M. Szachniuk*, A. Wojtowicz, J. Blazewicz);

  221. 08.06.2004, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, talk “Tabu search algorithm in the computation of NOE pathways in 2D-NOESY NMR spectra of RNA molecules" (M. Szachniuk*, A. Wojtowicz);

  222. 21-22.05.2004, 2nd Workshop on Bioinformatics, Mathematical Research and Conference Center, Bedlewo, Poland, talk "Automatic analysis of RNA tertiary structure with NMR techniques and deuteration process" (M. Szachniuk);

  223. 01-02.04.2004, Annual Meeting of the Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland, poster "An algorithm for an automatic NOE pathways analysis of 2D NMR spectra of RNA duplexes" (M. Szachniuk*, M. Popenda, R.W. Adamiak, J. Blazewicz);

  224. 01-02.04.2004, Annual Meeting of the Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland, talk "Automatic assignment of NOE pathways in 2D-NOESY NMR spectra of RNA duplexes" (M. Szachniuk);

    225. 2003

  225. 25.11.2003, Seminar of  the Laboratory of Bioinformatics, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland, talk "Elucidation of the TAR RNA tertiary structure with NMR techniques" (M. Szachniuk);

  226. 06-07.10.2003, The First Workshop on Bioinformatics, Polish Academy of Sciences, Poznan, Poland, talk "Computation of RNA tertiary structure" (M. Szachniuk*, M. Popenda);

  227. 29.05.2003, Conference 'RNAi Panorama in Poland', Polish Academy of Sciences, Poznan, Poland, talk "Algorithm and its application for automatic analysis of the NOE path in the NMR spectra of RNA molecules" (M. Szachniuk);

  228. 27.05.2003, Seminar of the Institute of Computing Science, Poznan University of Technology, Poland, talk "RNA structural calculation" (M. Szachniuk);

  229. 10-13.04.2003, RECOMB'03: 7th Annual International Conference on Research in Computational Molecular Biology, Berlin, Germany, poster "A combinatorial analysis of 2D NMR spectra of RNA duplexes" (M. Szachniuk*, R.W. Adamiak, P. Formanowicz, Z. Gdaniec, M. Kasprzak, M. Popenda, J. Blazewicz);

    230. 2002

  230. 24-25.06.2002, Polish–Japanese Bilateral Seminar on Bioinformatics, Science Center, Polish Academy of Sciences, Poznan, Poland, talk "On the complexity of NOE pathway construction of RNA duplexes" (M. Szachniuk*, J. Blazewicz);

  231. 25-26.03.2002,  Annual Meeting of the Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland, poster "Combinatorial analysis of 2D-NOESY spectra in a search for RNA tertiary structure" (M. Szachniuk*, J. Blazewicz);

  232. 12.02.2002, Seminar of the NMR-based Structural Biology Department, Max-Planck Institute for Biophysical Chemistry, Goettingen, Germany, invited talk "Combinatorial analysis of 2D-NOESY spectra in a search for RNA tertiary structure" (M. Szachniuk*, J. Blazewicz);

    233. 2001

  233. 22-23.10.2001, MPG-Polish Symposium on Bioinformatics, Max-Planck Society, Harnack Haus, Berlin-Dahlem, Germany, talk "Analysis of NMR spectra of RNA chains by combinatorial algorithms" (M. Szachniuk*, J. Blazewicz);

  234. 14-19.10.2001, ICOLE'01: International Workshop on Scheduling and Sequencing, Lessach, Austria, talk "Analysis of RNA tertiary structure problem complexity" (M. Szachniuk);

  235. 10.05.2001, Seminar of the Laboratory of Algorithm Design and Data Structures, Institute of Computing Science, Poznan University of Technology, Poland, talk "Combinatorial analysis of 3-dimensional RNA structure with the use of NMR experiment" (M. Szachniuk*, I. Krol, J. Blazewicz);

    236. 1998

  236. 27-31.08.1998, The Fourth International Conference on Difference Equations and Applications ICDEA98, Poznan, Poland, technical staff of the conference;