HOME
I am a PhD student at Poznan University of Technology, Institute of Computing Science.
For students
TBA
Publications and Conferences
Publications
Wiedemann J, Milostan M
StructAnalyzer - a tool for sequence versus structure similarity analysis. Acta Biochim Pol. 2016;63(4):753-757. PubMed PMID: 27801424
Wiedemann J, Zok T, Milostan M, Szachniuk M
LCS-TA to identify similar fragments in RNA 3D structures. BMC Bioinformatics. 2017 Oct 23;18(1):456. doi:10.1186/s12859-017-1867-6. PubMed PMID: 29058576
Magnus M, Antczak M, Zok T, Wiedemann J, Lukasiak P, Cao Y, Bujnicki J, Westhof E, Szachniuk M, Miao Z
RNA-Puzzles toolkit: a computational resource of RNA 3D structure benchmark datasets, structure manipulation, and evaluation tools. Nucleic Acids Res. 2020 Jan 24;48(2):576-588. doi: 10.1093/nar/gkz1108. PubMed PMID: 31799609.
Conferences
07.2019 FEBS, Krakow
06.2019 BIT19, Torun
09.2018 RNA: WIN, Obrzycko
09.2018 XI Convention of the Polish Bioinformatics Society, Wroclaw
07.2018 EURO2018 29th European Conference On Operational Research, Valencia
06.2018 BIT18 (Bioinformatics in Torun 2018)
06.2018 ECCO XXXI Fribourg (Szwajcaria)
05.2018 RNA&Computing, Biedrusko
04.2018 RECOMB 2018 Paryz
10.2017 Seminarium Zakladowe Politechniki Poznanskiej
10.2017 ICOLE17, Lessach (Austria)
09.2017 X Symposium of the Polish Bioinformatics Society, Uniejow
06.2017 BIT17 (Bioinformatics in Torun 2017)
05.2017 Joint EURO/ORSC/ECCO Conference 2017 on Combinatorial Optimization in Koper
04.2017 Seminarium PAN
09.2016 ICOLE16, Lessach (Austria)
09.2016 9th Symposium of the Polish Bioinformatics Society, Bialystok
07.2016 Euro2016 - 28th European Conference on Operational Research, Poznan
06.2016 BIT16 (Bioinformatics in Torun 2016)
06.2016 Seminarium Zakladowe Politechniki Poznanskiej
Contact
Jakub Wiedemann, M.Sc.
Institute of Computing Science
Poznan University of Technology
Piotrowo 2
60-965 Poznan
Poland
room: 2.6.26
phone: +48 61 665 30 40
mail: jakub.wiedemann@cs.put.poznan.pl
www.cs.put.poznan.pl/jwiedemann